BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F06LP1|AL426559
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1712 1605 0.0
>3x_Contig1712
Length = 23668
Score = 1605 bits (806), Expect = 0.0
Identities = 843/858 (98%), Gaps = 1/858 (0%)
Strand = Plus / Minus
Query: 1 gatcatcgaacctattcaatccgaag-tggtgacaaccacgcctccaaatacttcttgca 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 11551 gatcatcgaacctattcaatccgaaggtggtgacaaccacgcctccaaatacttcttgca 11492
Query: 60 aagcttgagagatttgacctccaaatacaacgtcgtttacatcattgatgaagttcaaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11491 aagcttgagagatttgacctccaaatacaacgtcgtttacatcattgatgaagttcaaac 11432
Query: 120 tggtgtcggtgctactggtaagttctggtgccacgaatgggctgacattcaaccaccagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11431 tggtgtcggtgctactggtaagttctggtgccacgaatgggctgacattcaaccaccagt 11372
Query: 180 tgatttggtcactttctccaagaagttccaatccgctggttactggttccacgatgacag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11371 tgatttggtcactttctccaagaagttccaatccgctggttactggttccacgatgacag 11312
Query: 240 attcattcctaataaggcttacagacaattcaacacctggtgtggtgatccagctagaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11311 attcattcctaataaggcttacagacaattcaacacctggtgtggtgatccagctagaat 11252
Query: 300 gattattgctggtgccattggtcaagaaatcgtagacaacaacttggtagatcaatgtgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11251 gattattgctggtgccattggtcaagaaatcgtagacaacaacttggtagatcaatgtgc 11192
Query: 360 tcgtgtcggtgattacttgttcgaaaagttggaaaaattgcaagcaaaatacccaaccag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11191 tcgtgtcggtgattacttgttcgaaaagttggaaaaattgcaagcaaaatacccaaccag 11132
Query: 420 attgatcaacttgagaggtaagaaccgtggtacatttatcgcttttgatttggaaacttc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11131 attgatcaacttgagaggtaagaaccgtggtacatttatcgcttttgatttggaaacttc 11072
Query: 480 ggctgaaagagaccagctattgaagctcttgaagagcaatggctgcmacgtcggtggttg 539
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11071 ggctgaaagagaccagctattgaagctcttgaagagcaatggctgcaacgtcggtggttg 11012
Query: 540 tgctgaaaagtctgttagactaagaccatccttaactttcgaagaaaagcatgctgacat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11011 tgctgaaaagtctgttagactaagaccatccttaactttcgaagaaaagcatgctgacat 10952
Query: 600 ctttgtcgatgctttggaaaagtctattggccaactataaaatactgttctttcagttcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10951 ctttgtcgatgctttggaaaagtctattggccaactataaaatactgttctttcagttcc 10892
Query: 660 tcatcagaacatgtatcaaaccccacacgattagtgtattcttacgtaaatagaagttat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10891 tcatcagaacatgtatcaaaccccacacgattagtgtattcttacgtaaatagaagttat 10832
Query: 720 ttataagaacgcctcataattatataaaatgtgactataattattatraaaaaaaaaaaa 779
||||||||||||||||||||||||||||||||||||||||||||||| | | || |
Sbjct: 10831 ttataagaacgcctcataattatataaaatgtgactataattattatgacagaacggatt 10772
Query: 780 awrmwtcatacaaatacatggcagtttttcaacgagccaaagcttctttgacattcaagt 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10771 ttgcttcatacaaatacatggcagtttttcaacgagccaaagcttctttgacattcaagt 10712
Query: 840 atgcatgaaccttatttt 857
||||||||||||||||||
Sbjct: 10711 atgcatgaaccttatttt 10694
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,233
Number of Sequences: 1807
Number of extensions: 13233
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)